Combining normalized intensities of a peptide observed in two or more fractions

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august
Phosphoserine Member
Phosphoserine Member
Posts: 12
Joined: Tue Jan 07, 2014 8:59 am

Combining normalized intensities of a peptide observed in two or more fractions

Postby august » Tue Feb 07, 2017 2:26 pm

Hello All,

Can anybody tell about how to normalize the intensities of a peptide observed in two or more fractions and combine them to a single value

Thanks

Biomarker
Albumin Member
Posts: 88
Joined: Thu Aug 09, 2012 3:28 am

Re: Combining normalized intensities of a peptide observed in two or more fractions

Postby Biomarker » Thu Feb 16, 2017 3:11 am

Hi,

You can think about adding your MS files of different fractions into MaxQuant and specify experimental design. For more information refer to MaxQuant google group discussion orelse let me know, I can help you with that.

Good luck

august
Phosphoserine Member
Phosphoserine Member
Posts: 12
Joined: Tue Jan 07, 2014 8:59 am

Re: Combining normalized intensities of a peptide observed in two or more fractions

Postby august » Thu Feb 23, 2017 11:45 am

Thanks, I'll give Maxquant a try


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